Kubernetes master node not ready state

9/20/2019

I have fallowed the this web site to configure kubernetes in aws ubuntu(18.04) ec2 instance. I have fallowed same steps in above web page. But after applied Network Overlay, core dns pod's state not changed to running state. enter image description here

My installed kubernetes version as bellow

  • kubeadm - GitVersion:"v1.16.0"
  • kubectl - GitVersion:"v1.16.0"
  • kubelet - Kubernetes v1.16.0

resolve this issue i have tried the this answer in stackoverflow

How can i resolve this issue ?

The output of kubectl get nodes

enter image description here

out put of kubectl describe pod coredns-644d7b6d9-nv9mj -n kube-system

  ubuntu@master:~$ sudo kubectl describe pod coredns-644d7b6d9-nv9mj -n kube-system
    Name:                 coredns-644d7b6d9-nv9mj
    Namespace:            kube-system
    Priority:             2000000000
    Priority Class Name:  system-cluster-critical
    Node:                 <none>
    Labels:               k8s-app=kube-dns
                          pod-template-hash=644d7b6d9
    Annotations:          <none>
    Status:               Pending
    IP:
    IPs:                  <none>
    Controlled By:        ReplicaSet/coredns-644d7b6d9
    Containers:
      coredns:
        Image:       k8s.gcr.io/coredns:1.6.2
        Ports:       53/UDP, 53/TCP, 9153/TCP
        Host Ports:  0/UDP, 0/TCP, 0/TCP
        Args:
          -conf
          /etc/coredns/Corefile
        Limits:
          memory:  170Mi
        Requests:
          cpu:        100m
          memory:     70Mi
        Liveness:     http-get http://:8080/health delay=60s timeout=5s period=10s #success=1 #failure=5
        Readiness:    http-get http://:8181/ready delay=0s timeout=1s period=10s #success=1 #failure=3
        Environment:  <none>
        Mounts:
          /etc/coredns from config-volume (ro)
          /var/run/secrets/kubernetes.io/serviceaccount from coredns-token-54rgm (ro)
    Conditions:
      Type           Status
      PodScheduled   False
    Volumes:
      config-volume:
        Type:      ConfigMap (a volume populated by a ConfigMap)
        Name:      coredns
        Optional:  false
      coredns-token-54rgm:
        Type:        Secret (a volume populated by a Secret)
        SecretName:  coredns-token-54rgm
        Optional:    false
    QoS Class:       Burstable
    Node-Selectors:  beta.kubernetes.io/os=linux
    Tolerations:     CriticalAddonsOnly
                     node-role.kubernetes.io/master:NoSchedule
                     node.kubernetes.io/not-ready:NoExecute for 300s
                     node.kubernetes.io/unreachable:NoExecute for 300s
    Events:
      Type     Reason            Age        From               Message
      ----     ------            ----       ----               -------
      Warning  FailedScheduling  <unknown>  default-scheduler  0/1 nodes are available: 1 node(s) had taints that the pod didn't tolerate                                   .
      Warning  FailedScheduling  <unknown>  default-scheduler  0/1 nodes are available: 1 node(s) had taints that the pod didn't tolerate   
-- Harshana Samaranayake
amazon-ec2
kubernetes

1 Answer

9/20/2019

So basically there are some problems with flannel working on kubernetes v1.16 and you need to add "cniVersion": "0.2.0" to kube-flannel.yml file

---
apiVersion: policy/v1beta1
kind: PodSecurityPolicy
metadata:
  name: psp.flannel.unprivileged
  annotations:
    seccomp.security.alpha.kubernetes.io/allowedProfileNames: docker/default
    seccomp.security.alpha.kubernetes.io/defaultProfileName: docker/default
    apparmor.security.beta.kubernetes.io/allowedProfileNames: runtime/default
    apparmor.security.beta.kubernetes.io/defaultProfileName: runtime/default
spec:
  privileged: false
  volumes:
    - configMap
    - secret
    - emptyDir
    - hostPath
  allowedHostPaths:
    - pathPrefix: "/etc/cni/net.d"
    - pathPrefix: "/etc/kube-flannel"
    - pathPrefix: "/run/flannel"
  readOnlyRootFilesystem: false
  # Users and groups
  runAsUser:
    rule: RunAsAny
  supplementalGroups:
    rule: RunAsAny
  fsGroup:
    rule: RunAsAny
  # Privilege Escalation
  allowPrivilegeEscalation: false
  defaultAllowPrivilegeEscalation: false
  # Capabilities
  allowedCapabilities: ['NET_ADMIN']
  defaultAddCapabilities: []
  requiredDropCapabilities: []
  # Host namespaces
  hostPID: false
  hostIPC: false
  hostNetwork: true
  hostPorts:
  - min: 0
    max: 65535
  # SELinux
  seLinux:
    # SELinux is unsed in CaaSP
    rule: 'RunAsAny'
---
kind: ClusterRole
apiVersion: rbac.authorization.k8s.io/v1beta1
metadata:
  name: flannel
rules:
  - apiGroups: ['extensions']
    resources: ['podsecuritypolicies']
    verbs: ['use']
    resourceNames: ['psp.flannel.unprivileged']
  - apiGroups:
      - ""
    resources:
      - pods
    verbs:
      - get
  - apiGroups:
      - ""
    resources:
      - nodes
    verbs:
      - list
      - watch
  - apiGroups:
      - ""
    resources:
      - nodes/status
    verbs:
      - patch
---
kind: ClusterRoleBinding
apiVersion: rbac.authorization.k8s.io/v1beta1
metadata:
  name: flannel
roleRef:
  apiGroup: rbac.authorization.k8s.io
  kind: ClusterRole
  name: flannel
subjects:
- kind: ServiceAccount
  name: flannel
  namespace: kube-system
---
apiVersion: v1
kind: ServiceAccount
metadata:
  name: flannel
  namespace: kube-system
---
kind: ConfigMap
apiVersion: v1
metadata:
  name: kube-flannel-cfg
  namespace: kube-system
  labels:
    tier: node
    app: flannel
data:
  cni-conf.json: |
    {
      "name": "cbr0",
      "cniVersion": "0.2.0",
      "plugins": [
        {
          "type": "flannel",
          "delegate": {
            "hairpinMode": true,
            "isDefaultGateway": true
          }
        },
        {
          "type": "portmap",
          "capabilities": {
            "portMappings": true
          }
        }
      ]
    }
  net-conf.json: |
    {
      "Network": "10.244.0.0/16",
      "Backend": {
        "Type": "vxlan"
      }
    }
---
apiVersion: apps/v1
kind: DaemonSet
metadata:
  name: kube-flannel-ds-amd64
  namespace: kube-system
  labels:
    tier: node
    app: flannel
spec:
  selector:
    matchLabels:
      app: flannel
  template:
    metadata:
      labels:
        tier: node
        app: flannel
    spec:
      hostNetwork: true
      nodeSelector:
        beta.kubernetes.io/arch: amd64
      tolerations:
      - operator: Exists
        effect: NoSchedule
      serviceAccountName: flannel
      initContainers:
      - name: install-cni
        image: quay.io/coreos/flannel:v0.11.0-amd64
        command:
        - cp
        args:
        - -f
        - /etc/kube-flannel/cni-conf.json
        - /etc/cni/net.d/10-flannel.conflist
        volumeMounts:
        - name: cni
          mountPath: /etc/cni/net.d
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      containers:
      - name: kube-flannel
        image: quay.io/coreos/flannel:v0.11.0-amd64
        command:
        - /opt/bin/flanneld
        args:
        - --ip-masq
        - --kube-subnet-mgr
        resources:
          requests:
            cpu: "100m"
            memory: "50Mi"
          limits:
            cpu: "100m"
            memory: "50Mi"
        securityContext:
          privileged: false
          capabilities:
             add: ["NET_ADMIN"]
        env:
        - name: POD_NAME
          valueFrom:
            fieldRef:
              fieldPath: metadata.name
        - name: POD_NAMESPACE
          valueFrom:
            fieldRef:
              fieldPath: metadata.namespace
        volumeMounts:
        - name: run
          mountPath: /run/flannel
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      volumes:
        - name: run
          hostPath:
            path: /run/flannel
        - name: cni
          hostPath:
            path: /etc/cni/net.d
        - name: flannel-cfg
          configMap:
            name: kube-flannel-cfg
---
apiVersion: apps/v1
kind: DaemonSet
metadata:
  name: kube-flannel-ds-arm64
  namespace: kube-system
  labels:
    tier: node
    app: flannel
spec:
  selector:
    matchLabels:
      app: flannel
  template:
    metadata:
      labels:
        tier: node
        app: flannel
    spec:
      hostNetwork: true
      nodeSelector:
        beta.kubernetes.io/arch: arm64
      tolerations:
      - operator: Exists
        effect: NoSchedule
      serviceAccountName: flannel
      initContainers:
      - name: install-cni
        image: quay.io/coreos/flannel:v0.11.0-arm64
        command:
        - cp
        args:
        - -f
        - /etc/kube-flannel/cni-conf.json
        - /etc/cni/net.d/10-flannel.conflist
        volumeMounts:
        - name: cni
          mountPath: /etc/cni/net.d
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      containers:
      - name: kube-flannel
        image: quay.io/coreos/flannel:v0.11.0-arm64
        command:
        - /opt/bin/flanneld
        args:
        - --ip-masq
        - --kube-subnet-mgr
        resources:
          requests:
            cpu: "100m"
            memory: "50Mi"
          limits:
            cpu: "100m"
            memory: "50Mi"
        securityContext:
          privileged: false
          capabilities:
             add: ["NET_ADMIN"]
        env:
        - name: POD_NAME
          valueFrom:
            fieldRef:
              fieldPath: metadata.name
        - name: POD_NAMESPACE
          valueFrom:
            fieldRef:
              fieldPath: metadata.namespace
        volumeMounts:
        - name: run
          mountPath: /run/flannel
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      volumes:
        - name: run
          hostPath:
            path: /run/flannel
        - name: cni
          hostPath:
            path: /etc/cni/net.d
        - name: flannel-cfg
          configMap:
            name: kube-flannel-cfg
---
apiVersion: apps/v1
kind: DaemonSet
metadata:
  name: kube-flannel-ds-arm
  namespace: kube-system
  labels:
    tier: node
    app: flannel
spec:
  selector:
    matchLabels:
      app: flannel
  template:
    metadata:
      labels:
        tier: node
        app: flannel
    spec:
      hostNetwork: true
      nodeSelector:
        beta.kubernetes.io/arch: arm
      tolerations:
      - operator: Exists
        effect: NoSchedule
      serviceAccountName: flannel
      initContainers:
      - name: install-cni
        image: quay.io/coreos/flannel:v0.11.0-arm
        command:
        - cp
        args:
        - -f
        - /etc/kube-flannel/cni-conf.json
        - /etc/cni/net.d/10-flannel.conflist
        volumeMounts:
        - name: cni
          mountPath: /etc/cni/net.d
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      containers:
      - name: kube-flannel
        image: quay.io/coreos/flannel:v0.11.0-arm
        command:
        - /opt/bin/flanneld
        args:
        - --ip-masq
        - --kube-subnet-mgr
        resources:
          requests:
            cpu: "100m"
            memory: "50Mi"
          limits:
            cpu: "100m"
            memory: "50Mi"
        securityContext:
          privileged: false
          capabilities:
             add: ["NET_ADMIN"]
        env:
        - name: POD_NAME
          valueFrom:
            fieldRef:
              fieldPath: metadata.name
        - name: POD_NAMESPACE
          valueFrom:
            fieldRef:
              fieldPath: metadata.namespace
        volumeMounts:
        - name: run
          mountPath: /run/flannel
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      volumes:
        - name: run
          hostPath:
            path: /run/flannel
        - name: cni
          hostPath:
            path: /etc/cni/net.d
        - name: flannel-cfg
          configMap:
            name: kube-flannel-cfg
---
apiVersion: apps/v1
kind: DaemonSet
metadata:
  name: kube-flannel-ds-ppc64le
  namespace: kube-system
  labels:
    tier: node
    app: flannel
spec:
  selector:
    matchLabels:
      app: flannel
  template:
    metadata:
      labels:
        tier: node
        app: flannel
    spec:
      hostNetwork: true
      nodeSelector:
        beta.kubernetes.io/arch: ppc64le
      tolerations:
      - operator: Exists
        effect: NoSchedule
      serviceAccountName: flannel
      initContainers:
      - name: install-cni
        image: quay.io/coreos/flannel:v0.11.0-ppc64le
        command:
        - cp
        args:
        - -f
        - /etc/kube-flannel/cni-conf.json
        - /etc/cni/net.d/10-flannel.conflist
        volumeMounts:
        - name: cni
          mountPath: /etc/cni/net.d
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      containers:
      - name: kube-flannel
        image: quay.io/coreos/flannel:v0.11.0-ppc64le
        command:
        - /opt/bin/flanneld
        args:
        - --ip-masq
        - --kube-subnet-mgr
        resources:
          requests:
            cpu: "100m"
            memory: "50Mi"
          limits:
            cpu: "100m"
            memory: "50Mi"
        securityContext:
          privileged: false
          capabilities:
             add: ["NET_ADMIN"]
        env:
        - name: POD_NAME
          valueFrom:
            fieldRef:
              fieldPath: metadata.name
        - name: POD_NAMESPACE
          valueFrom:
            fieldRef:
              fieldPath: metadata.namespace
        volumeMounts:
        - name: run
          mountPath: /run/flannel
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      volumes:
        - name: run
          hostPath:
            path: /run/flannel
        - name: cni
          hostPath:
            path: /etc/cni/net.d
        - name: flannel-cfg
          configMap:
            name: kube-flannel-cfg
---
apiVersion: apps/v1
kind: DaemonSet
metadata:
  name: kube-flannel-ds-s390x
  namespace: kube-system
  labels:
    tier: node
    app: flannel
spec:
  selector:
    matchLabels:
      app: flannel
  template:
    metadata:
      labels:
        tier: node
        app: flannel
    spec:
      hostNetwork: true
      nodeSelector:
        beta.kubernetes.io/arch: s390x
      tolerations:
      - operator: Exists
        effect: NoSchedule
      serviceAccountName: flannel
      initContainers:
      - name: install-cni
        image: quay.io/coreos/flannel:v0.11.0-s390x
        command:
        - cp
        args:
        - -f
        - /etc/kube-flannel/cni-conf.json
        - /etc/cni/net.d/10-flannel.conflist
        volumeMounts:
        - name: cni
          mountPath: /etc/cni/net.d
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      containers:
      - name: kube-flannel
        image: quay.io/coreos/flannel:v0.11.0-s390x
        command:
        - /opt/bin/flanneld
        args:
        - --ip-masq
        - --kube-subnet-mgr
        resources:
          requests:
            cpu: "100m"
            memory: "50Mi"
          limits:
            cpu: "100m"
            memory: "50Mi"
        securityContext:
          privileged: false
          capabilities:
             add: ["NET_ADMIN"]
        env:
        - name: POD_NAME
          valueFrom:
            fieldRef:
              fieldPath: metadata.name
        - name: POD_NAMESPACE
          valueFrom:
            fieldRef:
              fieldPath: metadata.namespace
        volumeMounts:
        - name: run
          mountPath: /run/flannel
        - name: flannel-cfg
          mountPath: /etc/kube-flannel/
      volumes:
        - name: run
          hostPath:
            path: /run/flannel
        - name: cni
          hostPath:
            path: /etc/cni/net.d
        - name: flannel-cfg
          configMap:
            name: kube-flannel-cfg

I added this there so everything you need to do is use:

sudo kubeadm reset 

sudo kubeadm init --pod-network-cidr=10.244.0.0/16

mkdir -p $HOME/.kube
sudo cp -i /etc/kubernetes/admin.conf $HOME/.kube/config
sudo chown $(id -u):$(id -g) $HOME/.kube/config

sudo sysctl net.bridge.bridge-nf-call-iptables=1

use nano or vi to create a kube-flannel.yaml file and copy above yaml to it.

sudo kubectl apply -f kube-flannel.yaml
-- jt97
Source: StackOverflow