Official mysql:8.0
(aka 8.0.4
) image is taking unusual time (approximately 10+ minutes) to initialize the database in docker (local machine).
If you look closely at log's time, the last line took 7 minutes to execute.
Initializing database
2018-04-09T10:00:29.926078Z 0 [Warning] [MY-011070] Disabling symbolic links using --skip-symbolic-links (or equivalent) is the default. Consider not using this option as it is deprecated and will be removed in a future release.
2018-04-09T10:00:29.926165Z 0 [System] [MY-010116] /usr/sbin/mysqld (mysqld 8.0.4-rc) starting as process 30 ...
mbind: Operation not permitted
mbind: Operation not permitted
mbind: Operation not permitted
mbind: Operation not permitted
2018-04-09T10:00:46.842725Z 0 [Warning] [MY-010068] CA certificate ca.pem is self signed.
2018-04-09T10:00:46.903128Z 5 [Warning] [MY-010453] root@localhost is created with an empty password ! Please consider switching off the --initialize-insecure option.
2018-04-09T10:07:28.643932Z 5 [Warning] [MY-010315] 'user' entry 'mysql.infoschema@localhost' ignored in --skip-name-resolve mode.
For your Information, in this same machine, mysql:8.0.3
doesn't take much time at all to Initialize the Database.
Here is my configuration:
OS: ubuntu 16.04
$ docker version
Client:
Version: 17.12.1-ce
API version: 1.35
Go version: go1.9.4
Git commit: 7390fc6
Built: Tue Feb 27 22:17:40 2018
OS/Arch: linux/amd64
Server:
Engine:
Version: 17.12.1-ce
API version: 1.35 (minimum version 1.12)
Go version: go1.9.4
Git commit: 7390fc6
Built: Tue Feb 27 22:16:13 2018
OS/Arch: linux/amd64
Experimental: false
Process to recreate and full log:
$ docker pull mysql:8.0
8.0: Pulling from library/mysql
2a72cbf407d6: Pull complete
38680a9b47a8: Pull complete
4c732aa0eb1b: Pull complete
c5317a34eddd: Pull complete
f92be680366c: Pull complete
e8ecd8bec5ab: Pull complete
2a650284a6a8: Pull complete
5127cdce4b46: Pull complete
e20139ed3159: Pull complete
4c9ba8a8a3da: Pull complete
16cd0f3afb27: Pull complete
0e4872d58e1f: Pull complete
Digest: sha256:7004063f8bd0c7bade8d1c526b9b8f5188c8288f411d76ee4ba83131e00c6f02
Status: Downloaded newer image for mysql:8.0
$ docker run --name some-mysql -e MYSQL_ROOT_PASSWORD=my-secret-pw -d mysql:8.0
b9c5d67233743dc085c50244526f5b12bd862cd50cdc0cb889b2dc549c4a396d
$ docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
b9c5d6723374 mysql:8.0 "docker-entrypoint.s…" 5 seconds ago Up 3 seconds 3306/tcp some-mysql
$ docker logs -f b9c5d6723374
Initializing database
2018-04-09T10:00:29.926078Z 0 [Warning] [MY-011070] Disabling symbolic links using --skip-symbolic-links (or equivalent) is the default. Consider not using this option as it is deprecated and will be removed in a future release.
2018-04-09T10:00:29.926165Z 0 [System] [MY-010116] /usr/sbin/mysqld (mysqld 8.0.4-rc) starting as process 30 ...
mbind: Operation not permitted
mbind: Operation not permitted
mbind: Operation not permitted
mbind: Operation not permitted
2018-04-09T10:00:46.842725Z 0 [Warning] [MY-010068] CA certificate ca.pem is self signed.
2018-04-09T10:00:46.903128Z 5 [Warning] [MY-010453] root@localhost is created with an empty password ! Please consider switching off the --initialize-insecure option.
2018-04-09T10:07:28.643932Z 5 [Warning] [MY-010315] 'user' entry 'mysql.infoschema@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:28.644008Z 5 [Warning] [MY-010315] 'user' entry 'mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:28.644033Z 5 [Warning] [MY-010315] 'user' entry 'mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:28.644051Z 5 [Warning] [MY-010315] 'user' entry 'root@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:28.644082Z 5 [Warning] [MY-010323] 'db' entry 'performance_schema mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:28.644094Z 5 [Warning] [MY-010323] 'db' entry 'sys mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:28.644112Z 5 [Warning] [MY-010311] 'proxies_priv' entry '@ root@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:28.644240Z 5 [Warning] [MY-010330] 'tables_priv' entry 'user mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:28.644257Z 5 [Warning] [MY-010330] 'tables_priv' entry 'sys_config mysql.sys@localhost' ignored in --skip-name-resolve mode.
Database initialized
MySQL init process in progress...
2018-04-09T10:07:44.797619Z 0 [Warning] [MY-011070] Disabling symbolic links using --skip-symbolic-links (or equivalent) is the default. Consider not using this option as it is deprecated and will be removed in a future release.
2018-04-09T10:07:44.797712Z 0 [System] [MY-010116] /usr/sbin/mysqld (mysqld 8.0.4-rc-log) starting as process 64 ...
mbind: Operation not permitted
mbind: Operation not permitted
mbind: Operation not permitted
mbind: Operation not permitted
MySQL init process in progress...
2018-04-09T10:07:45.990317Z 0 [Warning] [MY-010068] CA certificate ca.pem is self signed.
2018-04-09T10:07:46.040103Z 0 [Warning] [MY-000000] Insecure configuration for --pid-file: Location '/var/run/mysqld' in the path is accessible to all OS users. Consider choosing a different directory.
2018-04-09T10:07:46.046970Z 0 [Warning] [MY-010315] 'user' entry 'mysql.infoschema@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:46.047013Z 0 [Warning] [MY-010315] 'user' entry 'mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:46.047029Z 0 [Warning] [MY-010315] 'user' entry 'mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:46.047046Z 0 [Warning] [MY-010315] 'user' entry 'root@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:46.047078Z 0 [Warning] [MY-010323] 'db' entry 'performance_schema mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:46.047091Z 0 [Warning] [MY-010323] 'db' entry 'sys mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:46.047107Z 0 [Warning] [MY-010311] 'proxies_priv' entry '@ root@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:46.050079Z 0 [Warning] [MY-010330] 'tables_priv' entry 'user mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:46.050115Z 0 [Warning] [MY-010330] 'tables_priv' entry 'sys_config mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:46.058044Z 0 [System] [MY-010931] /usr/sbin/mysqld: ready for connections. Version: '8.0.4-rc-log' socket: '/var/run/mysqld/mysqld.sock' port: 0 MySQL Community Server (GPL).
Warning: Unable to load '/usr/share/zoneinfo/iso3166.tab' as time zone. Skipping it.
Warning: Unable to load '/usr/share/zoneinfo/leap-seconds.list' as time zone. Skipping it.
Warning: Unable to load '/usr/share/zoneinfo/zone.tab' as time zone. Skipping it.
Warning: Unable to load '/usr/share/zoneinfo/zone1970.tab' as time zone. Skipping it.
2018-04-09T10:07:50.304129Z 9 [Warning] [MY-010315] 'user' entry 'mysql.infoschema@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:50.304156Z 9 [Warning] [MY-010315] 'user' entry 'mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:50.304166Z 9 [Warning] [MY-010315] 'user' entry 'mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:50.304175Z 9 [Warning] [MY-010315] 'user' entry 'root@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:50.304197Z 9 [Warning] [MY-010323] 'db' entry 'performance_schema mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:50.304207Z 9 [Warning] [MY-010323] 'db' entry 'sys mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:50.304218Z 9 [Warning] [MY-010311] 'proxies_priv' entry '@ root@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:50.304321Z 9 [Warning] [MY-010330] 'tables_priv' entry 'user mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:50.304332Z 9 [Warning] [MY-010330] 'tables_priv' entry 'sys_config mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:53.074527Z 0 [System] [MY-010910] /usr/sbin/mysqld: Shutdown complete.
MySQL init process done. Ready for start up.
2018-04-09T10:07:53.336773Z 0 [Warning] [MY-011070] Disabling symbolic links using --skip-symbolic-links (or equivalent) is the default. Consider not using this option as it is deprecated and will be removed in a future release.
2018-04-09T10:07:53.336883Z 0 [System] [MY-010116] /usr/sbin/mysqld (mysqld 8.0.4-rc-log) starting as process 1 ...
mbind: Operation not permitted
mbind: Operation not permitted
mbind: Operation not permitted
mbind: Operation not permitted
2018-04-09T10:07:54.704270Z 0 [Warning] [MY-010068] CA certificate ca.pem is self signed.
2018-04-09T10:07:54.833645Z 0 [Warning] [MY-000000] Insecure configuration for --pid-file: Location '/var/run/mysqld' in the path is accessible to all OS users. Consider choosing a different directory.
2018-04-09T10:07:54.841847Z 0 [Warning] [MY-010315] 'user' entry 'mysql.infoschema@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:54.841879Z 0 [Warning] [MY-010315] 'user' entry 'mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:54.841894Z 0 [Warning] [MY-010315] 'user' entry 'mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:54.841908Z 0 [Warning] [MY-010315] 'user' entry 'root@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:54.841931Z 0 [Warning] [MY-010323] 'db' entry 'performance_schema mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:54.841940Z 0 [Warning] [MY-010323] 'db' entry 'sys mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:54.841953Z 0 [Warning] [MY-010311] 'proxies_priv' entry '@ root@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:54.844864Z 0 [Warning] [MY-010330] 'tables_priv' entry 'user mysql.session@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:54.844947Z 0 [Warning] [MY-010330] 'tables_priv' entry 'sys_config mysql.sys@localhost' ignored in --skip-name-resolve mode.
2018-04-09T10:07:54.850382Z 0 [System] [MY-010931] /usr/sbin/mysqld: ready for connections. Version: '8.0.4-rc-log' socket: '/var/run/mysqld/mysqld.sock' port: 3306 MySQL Community Server (GPL).
Furthermore, this image is taking more than 25 minutes in minikube to initialize the database.
Minikube's Configuration:
Environment:
The yaml file I used:
apiVersion: v1
kind: Namespace
metadata:
name: demo
spec:
finalizers:
- kubernetes
---
apiVersion: v1
kind: Service
metadata:
name: mysql-gvr
namespace: demo
spec:
clusterIP: None
sessionAffinity: None
type: ClusterIP
---
apiVersion: apps/v1
kind: StatefulSet
metadata:
labels:
app: mysql
name: mysql-8
namespace: demo
spec:
replicas: 1
selector:
matchLabels:
app: mysql
serviceName: mysql-gvr
template:
metadata:
labels:
app: mysql
spec:
containers:
- env:
- name: MYSQL_ROOT_PASSWORD
value : "test"
image: mysql:8.0
name: mysql
ports:
- containerPort: 3306
name: db
protocol: TCP
volumeMounts:
- mountPath: /var/lib/mysql
name: data
volumeClaimTemplates:
- metadata:
annotations:
volume.beta.kubernetes.io/storage-class: standard
name: data
spec:
accessModes:
- ReadWriteOnce
resources:
requests:
storage: 1Gi
storageClassName: standard
---
apiVersion: v1
kind: Service
metadata:
name: mysql
namespace: demo
labels:
name: mysql
spec:
ports:
- port: 3306
selector:
name: mysql
Is this because mysql:8.0.4
is using new base image debian:stretch
? Any guideline will be appreciated.
I have also created an issue in github docker-library/mysql repository to have the track of the issue. Here is the issue link.
Looks like, it was an issue of slow storage. After upgrading my disk to SSD, the waiting time improved drastically.
My minikube memory was 4GB in both my previous and current setup. But, SSD is making a huge difference.